Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXS1O43638 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
FOXS1O43638 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.9■■□□□ 1.1
FOXS1O43638 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXS1O43638 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXS1O43638 AC131274.2-201ENST00000580697 1507 ntBASIC21.9■■□□□ 1.1
FOXS1O43638 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXS1O43638 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXS1O43638 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXS1O43638 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXS1O43638 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.89■■□□□ 1.09
FOXS1O43638 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FOXS1O43638 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.89■■□□□ 1.09
FOXS1O43638 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FOXS1O43638 KRT16P3-201ENST00000439127 1283 ntBASIC21.88■■□□□ 1.09
FOXS1O43638 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXS1O43638 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXS1O43638 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXS1O43638 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXS1O43638 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXS1O43638 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXS1O43638 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXS1O43638 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXS1O43638 AC004448.1-201ENST00000458332 883 ntBASIC21.87■■□□□ 1.09
FOXS1O43638 AC010997.5-201ENST00000609182 354 ntBASIC21.87■■□□□ 1.09
FOXS1O43638 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXS1O43638 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXS1O43638 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXS1O43638 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXS1O43638 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.86■■□□□ 1.09
FOXS1O43638 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXS1O43638 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXS1O43638 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXS1O43638 MTDHP2-201ENST00000601468 714 ntBASIC21.86■■□□□ 1.09
FOXS1O43638 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXS1O43638 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXS1O43638 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXS1O43638 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXS1O43638 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXS1O43638 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXS1O43638 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
FOXS1O43638 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXS1O43638 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXS1O43638 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXS1O43638 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXS1O43638 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXS1O43638 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
FOXS1O43638 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
FOXS1O43638 AC135731.1-201ENST00000569415 2548 ntBASIC21.83■■□□□ 1.09
FOXS1O43638 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.83■■□□□ 1.09
FOXS1O43638 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXS1O43638 MIR6722-201ENST00000617286 78 ntBASIC21.83■■□□□ 1.09
FOXS1O43638 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXS1O43638 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXS1O43638 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.83■■□□□ 1.09
FOXS1O43638 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXS1O43638 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.83■■□□□ 1.08
FOXS1O43638 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXS1O43638 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXS1O43638 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXS1O43638 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXS1O43638 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXS1O43638 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXS1O43638 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FOXS1O43638 AL022069.1-201ENST00000568025 1636 ntBASIC21.81■■□□□ 1.08
FOXS1O43638 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXS1O43638 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
FOXS1O43638 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXS1O43638 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.81■■□□□ 1.08
FOXS1O43638 AC131212.1-201ENST00000613771 668 ntBASIC21.81■■□□□ 1.08
FOXS1O43638 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
FOXS1O43638 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
FOXS1O43638 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXS1O43638 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXS1O43638 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXS1O43638 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXS1O43638 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
FOXS1O43638 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXS1O43638 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXS1O43638 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXS1O43638 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.8■■□□□ 1.08
FOXS1O43638 MIR6724-1-201ENST00000616420 92 ntBASIC21.8■■□□□ 1.08
FOXS1O43638 MIR6724-2-201ENST00000616483 92 ntBASIC21.8■■□□□ 1.08
FOXS1O43638 MIR6724-4-201ENST00000617390 92 ntBASIC21.8■■□□□ 1.08
FOXS1O43638 MIR6724-3-201ENST00000622482 92 ntBASIC21.8■■□□□ 1.08
FOXS1O43638 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXS1O43638 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms