Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV5A0A0B4J249 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV5A0A0B4J249 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 ECEL1P2-201ENST00000461596 1295 ntBASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
TRAV5A0A0B4J249 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV5A0A0B4J249 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV5A0A0B4J249 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 AC022413.1-201ENST00000624602 984 ntBASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV5A0A0B4J249 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV5A0A0B4J249 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV5A0A0B4J249 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV5A0A0B4J249 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV5A0A0B4J249 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV5A0A0B4J249 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV5A0A0B4J249 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV5A0A0B4J249 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV5A0A0B4J249 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV5A0A0B4J249 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV5A0A0B4J249 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV5A0A0B4J249 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAV5A0A0B4J249 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms