Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 RNU1-114P-201ENST00000365297 166 ntBASIC14.09□□□□□ -0.15
LRFN1Q9P244 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 ACTBP8-201ENST00000403258 1108 ntBASIC14.09□□□□□ -0.15
LRFN1Q9P244 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CNN2P8-201ENST00000421872 913 ntBASIC14.09□□□□□ -0.15
LRFN1Q9P244 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 AC132938.4-201ENST00000623835 848 ntBASIC14.09□□□□□ -0.15
LRFN1Q9P244 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRFN1Q9P244 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LRFN1Q9P244 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRFN1Q9P244 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.08□□□□□ -0.15
LRFN1Q9P244 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRFN1Q9P244 AC026691.1-201ENST00000602502 2017 ntBASIC14.08□□□□□ -0.15
LRFN1Q9P244 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.08□□□□□ -0.15
LRFN1Q9P244 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRFN1Q9P244 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRFN1Q9P244 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.08□□□□□ -0.15
LRFN1Q9P244 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LRFN1Q9P244 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 AL645937.2-201ENST00000396808 931 ntBASIC14.08□□□□□ -0.16
LRFN1Q9P244 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RPL5P21-201ENST00000404620 815 ntBASIC14.08□□□□□ -0.16
LRFN1Q9P244 AC026954.1-201ENST00000429771 1293 ntBASIC14.08□□□□□ -0.16
LRFN1Q9P244 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRFN1Q9P244 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.08□□□□□ -0.16
LRFN1Q9P244 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms