Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 PMS2P2-201ENST00000425039 1128 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AC004066.1-201ENST00000502488 802 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 AC005498.2-205ENST00000593218 784 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC40Q9H9A6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC40Q9H9A6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 MRPS18AP1-201ENST00000414458 589 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 DOC2GP-202ENST00000514950 1163 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 TPRX2P-201ENST00000535362 881 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 AC232323.1-201ENST00000540724 2099 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.58■□□□□ 0.08
LRRC40Q9H9A6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms