Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 AC005829.1-201ENST00000570002 483 ntBASIC13□□□□□ -0.33
HDHD3Q9BSH5 MIR4469-201ENST00000583919 79 ntBASIC13□□□□□ -0.33
HDHD3Q9BSH5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HDHD3Q9BSH5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13□□□□□ -0.33
HDHD3Q9BSH5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AL022342.1-201ENST00000400363 863 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AL079307.3-201ENST00000556114 283 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 MIR6080-201ENST00000617359 66 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AF228730.6-201ENST00000641497 218 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AC084121.3-201ENST00000641716 218 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AP001267.2-201ENST00000532619 2086 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 GRK6P1-201ENST00000400595 1711 ntBASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HDHD3Q9BSH5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HDHD3Q9BSH5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms