Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 INE2-201ENST00000630399 1874 ntBASIC18.75■□□□□ 0.59
NLRP3Q96P20 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NLRP3Q96P20 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRP3Q96P20 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.75■□□□□ 0.59
NLRP3Q96P20 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLRP3Q96P20 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NLRP3Q96P20 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.74■□□□□ 0.59
NLRP3Q96P20 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 FGFR3P5-201ENST00000564496 886 ntBASIC18.74■□□□□ 0.59
NLRP3Q96P20 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 AC009955.4-201ENST00000597192 544 ntBASIC18.74■□□□□ 0.59
NLRP3Q96P20 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 AL805961.1-203ENST00000641078 1258 ntBASIC18.74■□□□□ 0.59
NLRP3Q96P20 AC068587.8-201ENST00000641239 219 ntBASIC18.74■□□□□ 0.59
NLRP3Q96P20 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRP3Q96P20 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.74■□□□□ 0.59
NLRP3Q96P20 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 MAGEA5-201ENST00000446757 942 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 MARK2P5-201ENST00000507649 634 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 AC134698.3-201ENST00000523880 214 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 RN7SL574P-201ENST00000581512 297 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 AC138696.2-201ENST00000607376 223 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 AL136295.7-201ENST00000619226 1200 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 SHC1P1-201ENST00000425230 1745 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.73■□□□□ 0.59
NLRP3Q96P20 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NLRP3Q96P20 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NLRP3Q96P20 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms