Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CICP23-201ENST00000605013 2741 ntBASIC14.38□□□□□ -0.11
NUP43Q8NFH3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC068418.2-201ENST00000577309 3703 ntBASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 FGD5P1-202ENST00000614866 2498 ntBASIC14.37□□□□□ -0.11
NUP43Q8NFH3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 GNAQP1-201ENST00000444815 1067 ntBASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 RN7SL399P-201ENST00000471648 279 ntBASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 AC099063.4-201ENST00000641099 1602 ntBASIC14.37□□□□□ -0.11
NUP43Q8NFH3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NUP43Q8NFH3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.36□□□□□ -0.11
NUP43Q8NFH3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 GAPDHP40-201ENST00000505218 1006 ntBASIC14.36□□□□□ -0.11
NUP43Q8NFH3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms