Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 TMEM14DP-201ENST00000422205 345 ntBASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AC012441.1-201ENST00000446669 685 ntBASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 AL137783.1-201ENST00000623494 1896 ntBASIC13.53□□□□□ -0.24
ZIC4Q8N9L1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZIC4Q8N9L1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 ACTBP8-201ENST00000403258 1108 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 EIF3FP3-201ENST00000434851 1086 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 GAPDHP21-201ENST00000450301 1010 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AP001889.1-201ENST00000525414 633 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC068587.3-201ENST00000526613 355 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 PTP4A1P2-201ENST00000546033 454 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 DUX4L47-201ENST00000566374 394 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC134312.5-201ENST00000568031 1313 ntBASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ZIC4Q8N9L1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms