Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 AL162726.2-201ENST00000438986 1017 ntBASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 IGHV3-71-201ENST00000523324 359 ntBASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 CLUHP6-201ENST00000580789 941 ntBASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 BX539320.1-201ENST00000623759 877 ntBASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCUBE3Q8IX30 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 REXO1L5P-201ENST00000622260 2098 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 INE1-201ENST00000456273 945 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AC011495.1-201ENST00000498085 584 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AC132938.2-201ENST00000579188 680 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 RPSAP52-203ENST00000622976 1023 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AL591163.1-201ENST00000641757 987 ntBASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SCUBE3Q8IX30 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 AC093433.1-201ENST00000458048 571 ntBASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 RN7SL837P-201ENST00000463010 287 ntBASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SCUBE3Q8IX30 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms