Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN4BQ8IWT1 AL138709.1-201ENST00000614840 1693 ntBASIC16.14■□□□□ 0.18
SCN4BQ8IWT1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCN4BQ8IWT1 PCDHA3-202ENST00000532566 4594 ntBASIC16.14■□□□□ 0.18
SCN4BQ8IWT1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AL645937.2-201ENST00000396808 931 ntBASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC026954.1-201ENST00000429771 1293 ntBASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC136621.1-201ENST00000624017 2304 ntBASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.14■□□□□ 0.17
SCN4BQ8IWT1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCN4BQ8IWT1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms