Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 NUP210P1-202ENST00000504322 710 ntBASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC106794.1-201ENST00000506935 792 ntBASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 MARK2P5-201ENST00000507649 634 ntBASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AL133499.1-201ENST00000596207 608 ntBASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC128714.1-201ENST00000637035 887 ntBASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AC105250.1-201ENST00000509378 2057 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AC010141.1-201ENST00000411585 623 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 Z97180.1-201ENST00000445173 988 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 TMEM198B-204ENST00000484016 896 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM71Q2Q1W2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 AL162727.3-201ENST00000635661 2787 ntBASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM71Q2Q1W2 MIR33B-201ENST00000385104 96 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms