Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 AL353779.1-201ENST00000434793 351 ntBASIC13.42□□□□□ -0.26
HIST1H3AP68431 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 AC107373.2-201ENST00000607735 490 ntBASIC13.42□□□□□ -0.26
HIST1H3AP68431 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIST1H3AP68431 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H3AP68431 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AL645937.2-201ENST00000396808 931 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 SPTLC1P1-201ENST00000447199 261 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 UGT1A2P-201ENST00000454886 866 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AC093004.1-201ENST00000508850 424 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AL049840.4-201ENST00000602422 811 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 SLC7A15P-201ENST00000424028 1363 ntBASIC13.41□□□□□ -0.26
HIST1H3AP68431 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H3AP68431 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H3AP68431 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AL390755.1-201ENST00000623716 2027 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AL138799.1-201ENST00000448213 1675 ntBASIC13.4□□□□□ -0.26
HIST1H3AP68431 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H3AP68431 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H3AP68431 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms