Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPT1AP50416 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPT1AP50416 AL137783.1-201ENST00000623494 1896 ntBASIC16.82■□□□□ 0.28
CPT1AP50416 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPT1AP50416 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CPT1AP50416 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
CPT1AP50416 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.81■□□□□ 0.28
CPT1AP50416 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 AC012508.2-201ENST00000567613 1472 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.81■□□□□ 0.28
CPT1AP50416 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.81■□□□□ 0.28
CPT1AP50416 CICP11-201ENST00000434745 2827 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 FAM58BP-201ENST00000439056 645 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.81■□□□□ 0.28
CPT1AP50416 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.81■□□□□ 0.28
CPT1AP50416 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.81■□□□□ 0.28
CPT1AP50416 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.81■□□□□ 0.28
CPT1AP50416 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.81■□□□□ 0.28
CPT1AP50416 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 SHC1P1-201ENST00000425230 1745 ntBASIC16.81■□□□□ 0.28
CPT1AP50416 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPT1AP50416 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.81■□□□□ 0.28
CPT1AP50416 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 REXO1L4P-201ENST00000605109 1937 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.8■□□□□ 0.28
CPT1AP50416 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CPT1AP50416 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.8■□□□□ 0.28
CPT1AP50416 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPT1AP50416 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.8■□□□□ 0.28
CPT1AP50416 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.8■□□□□ 0.28
CPT1AP50416 HINT2P1-201ENST00000419438 481 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 MAGEA5-201ENST00000446757 942 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CPT1AP50416 AC024681.1-201ENST00000521917 487 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.8■□□□□ 0.28
CPT1AP50416 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.8■□□□□ 0.28
CPT1AP50416 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.8■□□□□ 0.28
CPT1AP50416 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.8■□□□□ 0.28
CPT1AP50416 AC005324.6-201ENST00000587972 613 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 AC009955.4-201ENST00000597192 544 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CPT1AP50416 AL805961.1-203ENST00000641078 1258 ntBASIC16.8■□□□□ 0.28
CPT1AP50416 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPT1AP50416 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
CPT1AP50416 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.8■□□□□ 0.28
CPT1AP50416 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms