Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 PCDHA12-202ENST00000613593 2588 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDE6BP35913 AL627231.1-201ENST00000394467 1125 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6BP35913 RN7SL8P-201ENST00000461771 266 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6BP35913 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6BP35913 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.67■□□□□ 0.58
PDE6BP35913 AC132192.2-201ENST00000596206 1147 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 AC087045.2-201ENST00000606279 1003 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 AC103810.10-201ENST00000606504 343 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 AC092171.5-201ENST00000608012 942 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6BP35913 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.67■□□□□ 0.58
PDE6BP35913 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 AL008718.2-201ENST00000609206 1313 ntBASIC18.67■□□□□ 0.58
PDE6BP35913 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6BP35913 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6BP35913 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 AC112504.1-201ENST00000623415 1841 ntBASIC18.66■□□□□ 0.58
PDE6BP35913 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 AC078991.1-201ENST00000437297 610 ntBASIC18.66■□□□□ 0.58
PDE6BP35913 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.66■□□□□ 0.58
PDE6BP35913 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.66■□□□□ 0.58
PDE6BP35913 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.66■□□□□ 0.58
PDE6BP35913 AC135983.4-201ENST00000564116 1262 ntBASIC18.66■□□□□ 0.58
PDE6BP35913 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PDE6BP35913 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.66■□□□□ 0.58
PDE6BP35913 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDE6BP35913 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6BP35913 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6BP35913 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDE6BP35913 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDE6BP35913 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 AL157414.3-201ENST00000624276 1954 ntBASIC18.65■□□□□ 0.58
PDE6BP35913 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 AC239868.1-201ENST00000369385 493 ntBASIC18.65■□□□□ 0.58
PDE6BP35913 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6BP35913 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.65■□□□□ 0.58
PDE6BP35913 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.65■□□□□ 0.58
PDE6BP35913 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6BP35913 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.65■□□□□ 0.58
PDE6BP35913 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6BP35913 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6BP35913 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE6BP35913 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6BP35913 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms