Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.57□□□□□ -0.4
DEFA4P12838 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
DEFA4P12838 CYP4F24P-201ENST00000586049 1580 ntBASIC12.57□□□□□ -0.4
DEFA4P12838 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.57□□□□□ -0.4
DEFA4P12838 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
DEFA4P12838 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.57□□□□□ -0.4
DEFA4P12838 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.57□□□□□ -0.4
DEFA4P12838 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.57□□□□□ -0.4
DEFA4P12838 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.57□□□□□ -0.4
DEFA4P12838 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.57□□□□□ -0.4
DEFA4P12838 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 AL390755.1-201ENST00000623716 2027 ntBASIC12.57□□□□□ -0.4
DEFA4P12838 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
DEFA4P12838 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.57□□□□□ -0.4
DEFA4P12838 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.57□□□□□ -0.4
DEFA4P12838 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DEFA4P12838 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 FGD5P1-202ENST00000614866 2498 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
DEFA4P12838 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AC211486.1-202ENST00000416371 468 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 RBPMS2P1-201ENST00000437762 623 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AC211476.1-201ENST00000503899 468 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.56□□□□□ -0.4
DEFA4P12838 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 AC018529.1-201ENST00000613063 361 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AL513210.1-201ENST00000629608 234 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 AC084121.4-201ENST00000641598 221 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 AF228730.8-201ENST00000642140 221 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 AC131212.3-201ENST00000624087 4219 ntBASIC12.56□□□□□ -0.4
DEFA4P12838 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.56□□□□□ -0.4
DEFA4P12838 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.56□□□□□ -0.4
DEFA4P12838 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms