Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 AC104596.2-201ENST00000512793 793 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 AP001582.1-201ENST00000525856 295 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 AC008494.3-201ENST00000606615 944 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 AC004233.3-201ENST00000607794 1269 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 AC139749.1-202ENST00000617529 3139 ntBASIC17.68■□□□□ 0.42
CTDNEP1O95476 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.68■□□□□ 0.42
CTDNEP1O95476 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTDNEP1O95476 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KRT8P14-201ENST00000414254 1442 ntBASIC17.67■□□□□ 0.42
CTDNEP1O95476 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 CLUHP6-201ENST00000580789 941 ntBASIC17.67■□□□□ 0.42
CTDNEP1O95476 WFDC1-204ENST00000613603 549 ntBASIC17.67■□□□□ 0.42
CTDNEP1O95476 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CTDNEP1O95476 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDNEP1O95476 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDNEP1O95476 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDNEP1O95476 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDNEP1O95476 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDNEP1O95476 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDNEP1O95476 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 EIF3FP3-201ENST00000434851 1086 ntBASIC17.66■□□□□ 0.42
CTDNEP1O95476 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 AC190387.1-201ENST00000551683 408 ntBASIC17.66■□□□□ 0.42
CTDNEP1O95476 MIR4745-201ENST00000577608 62 ntBASIC17.66■□□□□ 0.42
CTDNEP1O95476 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CTDNEP1O95476 RPSAP52-203ENST00000622976 1023 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms