Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RN7SL665P-201ENST00000578793 300 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 MIR5001-201ENST00000580185 100 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 MIR6816-201ENST00000620368 66 ntBASIC24.56■■□□□ 1.52
IFT140Q96RY7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC24.56■■□□□ 1.52
IFT140Q96RY7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 HNRNPA1P27-201ENST00000412087 955 ntBASIC24.55■■□□□ 1.52
IFT140Q96RY7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 OR5BD1P-201ENST00000532527 817 ntBASIC24.55■■□□□ 1.52
IFT140Q96RY7 CYP4F36P-201ENST00000589193 186 ntBASIC24.55■■□□□ 1.52
IFT140Q96RY7 AC010976.2-201ENST00000609697 852 ntBASIC24.55■■□□□ 1.52
IFT140Q96RY7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 AL590440.2-201ENST00000641973 1595 ntBASIC24.55■■□□□ 1.52
IFT140Q96RY7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 API5-208ENST00000531273 1868 ntTSL 2 BASIC24.55■■□□□ 1.52
IFT140Q96RY7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
IFT140Q96RY7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 AC112504.1-201ENST00000623415 1841 ntBASIC24.54■■□□□ 1.52
IFT140Q96RY7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ACTG1P19-201ENST00000418987 1116 ntBASIC24.54■■□□□ 1.52
IFT140Q96RY7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 SIGLEC22P-201ENST00000599104 714 ntBASIC24.54■■□□□ 1.52
IFT140Q96RY7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IFT140Q96RY7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC24.54■■□□□ 1.52
IFT140Q96RY7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 PTGER4P2-201ENST00000328411 252 ntBASIC24.53■■□□□ 1.52
IFT140Q96RY7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 AC073869.2-201ENST00000417338 1026 ntBASIC24.53■■□□□ 1.52
IFT140Q96RY7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 PTGER4P3-201ENST00000458150 252 ntBASIC24.53■■□□□ 1.52
IFT140Q96RY7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
IFT140Q96RY7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 AC009090.5-201ENST00000624886 2285 ntBASIC24.53■■□□□ 1.52
IFT140Q96RY7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
IFT140Q96RY7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC24.52■■□□□ 1.52
IFT140Q96RY7 AC021016.3-201ENST00000608367 477 ntBASIC24.52■■□□□ 1.52
IFT140Q96RY7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC24.52■■□□□ 1.52
IFT140Q96RY7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
IFT140Q96RY7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
IFT140Q96RY7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC24.52■■□□□ 1.52
IFT140Q96RY7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
IFT140Q96RY7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms