Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 AJ011931.1-201ENST00000618749 2492 ntBASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MS4A4EQ96PG1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 RN7SL399P-201ENST00000471648 279 ntBASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 GAPDHP40-201ENST00000505218 1006 ntBASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 AC055876.2-201ENST00000531834 546 ntBASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.34□□□□□ -0.11
MS4A4EQ96PG1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MS4A4EQ96PG1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
MS4A4EQ96PG1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MS4A4EQ96PG1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
MS4A4EQ96PG1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 AC107373.2-201ENST00000607735 490 ntBASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
MS4A4EQ96PG1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms