Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 SPTLC1P1-201ENST00000447199 261 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 MEIS3P1-201ENST00000495167 958 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 DOC2GP-202ENST00000514950 1163 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 RN7SL204P-201ENST00000582831 262 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 AJ011932.1-201ENST00000621707 465 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 LINC00528-201ENST00000600723 2160 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 CICP24-201ENST00000605464 2705 ntBASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIMC1Q8NDZ2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIMC1Q8NDZ2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 AC138969.3-201ENST00000546612 1459 ntBASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 AC138932.2-201ENST00000548268 1459 ntBASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 AC126755.4-201ENST00000549796 1459 ntBASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SIMC1Q8NDZ2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms