Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
APLFQ8IW19 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 AL353705.2-201ENST00000428243 662 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 RN7SL692P-201ENST00000464677 288 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 PRYP6-201ENST00000514804 343 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
APLFQ8IW19 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 AGAP7P-201ENST00000582299 2062 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 AGAP14-201ENST00000624701 2060 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
APLFQ8IW19 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.35■□□□□ 0.05
APLFQ8IW19 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 HSPA7-201ENST00000445535 1927 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.35■□□□□ 0.05
APLFQ8IW19 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
APLFQ8IW19 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.35■□□□□ 0.05
APLFQ8IW19 CICP8-201ENST00000455800 2813 ntBASIC15.35■□□□□ 0.05
APLFQ8IW19 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 AC117489.1-201ENST00000625169 3217 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 SNX33P1-201ENST00000592116 1762 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
APLFQ8IW19 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 AC091951.1-201ENST00000512854 2465 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 OR8S1-201ENST00000310194 1080 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 FAM220BP-201ENST00000377689 816 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 COX5BP8-201ENST00000416911 349 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 AC009477.1-201ENST00000452936 217 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.34■□□□□ 0.05
APLFQ8IW19 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.34■□□□□ 0.05
APLFQ8IW19 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 CES1P1-201ENST00000421606 1704 ntBASIC15.34■□□□□ 0.05
APLFQ8IW19 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
APLFQ8IW19 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
APLFQ8IW19 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms