Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC023310.3-201ENST00000557027 670 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC100756.1-201ENST00000562736 682 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC138749.3-201ENST00000567691 622 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC116165.1-201ENST00000611806 668 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AC009118.2-201ENST00000613275 655 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC093004.1-201ENST00000508850 424 ntBASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF20Q5VTR2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AJ011931.1-201ENST00000618749 2492 ntBASIC18.34■□□□□ 0.53
RNF20Q5VTR2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 AC004790.1-201ENST00000612686 536 ntBASIC18.34■□□□□ 0.53
RNF20Q5VTR2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms