Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL162426.1-201ENST00000624141 743 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCS2P54868 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AL137783.1-201ENST00000623494 1896 ntBASIC17.54■□□□□ 0.4
HMGCS2P54868 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS2P54868 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS2P54868 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS2P54868 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGCS2P54868 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HMGCS2P54868 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGCS2P54868 AC105250.1-201ENST00000509378 2057 ntBASIC17.53■□□□□ 0.4
HMGCS2P54868 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS2P54868 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGCS2P54868 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 NUP210P1-202ENST00000504322 710 ntBASIC17.53■□□□□ 0.4
HMGCS2P54868 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 RN7SL163P-201ENST00000583100 276 ntBASIC17.53■□□□□ 0.4
HMGCS2P54868 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGCS2P54868 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
HMGCS2P54868 AC002472.3-201ENST00000640124 621 ntBASIC17.53■□□□□ 0.4
HMGCS2P54868 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HMGCS2P54868 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HMGCS2P54868 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS2P54868 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS2P54868 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS2P54868 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HMGCS2P54868 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS2P54868 TUBB8P8-201ENST00000458717 1058 ntBASIC17.52■□□□□ 0.4
HMGCS2P54868 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCS2P54868 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCS2P54868 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCS2P54868 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS2P54868 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 AC009955.4-201ENST00000597192 544 ntBASIC17.52■□□□□ 0.4
HMGCS2P54868 AC100757.4-201ENST00000626934 759 ntBASIC17.52■□□□□ 0.4
HMGCS2P54868 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS2P54868 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCS2P54868 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
HMGCS2P54868 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS2P54868 PCDHB19P-201ENST00000570871 2371 ntBASIC17.52■□□□□ 0.39
HMGCS2P54868 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCS2P54868 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCS2P54868 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
HMGCS2P54868 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS2P54868 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCS2P54868 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS2P54868 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCS2P54868 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS2P54868 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCS2P54868 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS2P54868 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms