Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AC012508.2-201ENST00000567613 1472 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC6A4P31645 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A4P31645 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SLC6A4P31645 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A4P31645 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC6A4P31645 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC6A4P31645 AC022616.1-201ENST00000518688 554 ntBASIC15.69■□□□□ 0.1
SLC6A4P31645 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 ECM1P1-201ENST00000604092 1279 ntBASIC15.69■□□□□ 0.1
SLC6A4P31645 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC6A4P31645 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.69■□□□□ 0.1
SLC6A4P31645 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC6A4P31645 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC6A4P31645 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC6A4P31645 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC6A4P31645 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A4P31645 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC6A4P31645 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 AC055811.4-201ENST00000624039 1754 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 MROH4P-201ENST00000431302 1578 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A4P31645 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC6A4P31645 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A4P31645 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SLC6A4P31645 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 FO681548.1-201ENST00000455617 1132 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC6A4P31645 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC6A4P31645 DUX4L47-201ENST00000566374 394 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC6A4P31645 AC004466.1-201ENST00000599515 1080 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC6A4P31645 AC138951.2-201ENST00000623455 1161 ntBASIC15.68■□□□□ 0.1
SLC6A4P31645 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC6A4P31645 REXO1L2P-201ENST00000425429 2069 ntBASIC15.67■□□□□ 0.1
SLC6A4P31645 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms