Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBC1P01850 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 GIMAP3P-201ENST00000495150 836 ntBASIC15.37■□□□□ 0.05
TRBC1P01850 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 AC022137.2-201ENST00000503482 481 ntBASIC15.37■□□□□ 0.05
TRBC1P01850 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 PTP4A1P2-201ENST00000546033 454 ntBASIC15.37■□□□□ 0.05
TRBC1P01850 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.37■□□□□ 0.05
TRBC1P01850 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 AC015936.2-201ENST00000593177 259 ntBASIC15.37■□□□□ 0.05
TRBC1P01850 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRBC1P01850 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBC1P01850 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRBC1P01850 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBC1P01850 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.37■□□□□ 0.05
TRBC1P01850 AP000845.1-201ENST00000581677 2131 ntBASIC15.37■□□□□ 0.05
TRBC1P01850 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBC1P01850 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBC1P01850 WASH3P-207ENST00000560956 1394 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBC1P01850 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRBC1P01850 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRBC1P01850 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBC1P01850 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 AC114812.1-204ENST00000449669 728 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 AC068587.3-201ENST00000526613 355 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.36■□□□□ 0.05
TRBC1P01850 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBC1P01850 AL035252.4-201ENST00000624174 288 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 MSTO2P-201ENST00000314835 1709 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRBC1P01850 AL360270.3-201ENST00000609118 1348 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.36■□□□□ 0.05
TRBC1P01850 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBC1P01850 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBC1P01850 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRBC1P01850 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRBC1P01850 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBC1P01850 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBC1P01850 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRBC1P01850 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRBC1P01850 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRBC1P01850 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBC1P01850 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms