Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CNOT4O95628 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.71□□□□□ -0.21
CNOT4O95628 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 TTTY23B-201ENST00000442790 549 ntBASIC13.71□□□□□ -0.21
CNOT4O95628 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
CNOT4O95628 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.71□□□□□ -0.21
CNOT4O95628 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CNOT4O95628 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CNOT4O95628 KRT8P22-201ENST00000562317 1415 ntBASIC13.71□□□□□ -0.22
CNOT4O95628 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CNOT4O95628 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CNOT4O95628 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CNOT4O95628 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CNOT4O95628 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.7□□□□□ -0.22
CNOT4O95628 AC022210.1-201ENST00000449856 793 ntBASIC13.7□□□□□ -0.22
CNOT4O95628 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 AC007389.4-201ENST00000454674 793 ntBASIC13.7□□□□□ -0.22
CNOT4O95628 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 RN7SL837P-201ENST00000463010 287 ntBASIC13.7□□□□□ -0.22
CNOT4O95628 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.7□□□□□ -0.22
CNOT4O95628 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.7□□□□□ -0.22
CNOT4O95628 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 AC120045.2-201ENST00000567334 178 ntBASIC13.7□□□□□ -0.22
CNOT4O95628 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 AC015936.2-201ENST00000593177 259 ntBASIC13.7□□□□□ -0.22
CNOT4O95628 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.7□□□□□ -0.22
CNOT4O95628 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CNOT4O95628 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.7□□□□□ -0.22
CNOT4O95628 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CNOT4O95628 DRD5P1-201ENST00000456605 1438 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms