Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.12■□□□□ 0.33
CLSTN1O94985 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.12■□□□□ 0.33
CLSTN1O94985 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.12■□□□□ 0.33
CLSTN1O94985 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 AL109936.8-201ENST00000641772 604 ntBASIC17.12■□□□□ 0.33
CLSTN1O94985 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLSTN1O94985 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.12■□□□□ 0.33
CLSTN1O94985 SSR4P1-203ENST00000599569 2260 ntBASIC17.12■□□□□ 0.33
CLSTN1O94985 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLSTN1O94985 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.12■□□□□ 0.33
CLSTN1O94985 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CLSTN1O94985 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.11■□□□□ 0.33
CLSTN1O94985 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.11■□□□□ 0.33
CLSTN1O94985 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 AL512361.1-201ENST00000554200 418 ntBASIC17.11■□□□□ 0.33
CLSTN1O94985 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.11■□□□□ 0.33
CLSTN1O94985 AL590560.3-201ENST00000623350 461 ntBASIC17.11■□□□□ 0.33
CLSTN1O94985 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.11■□□□□ 0.33
CLSTN1O94985 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
CLSTN1O94985 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
CLSTN1O94985 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
CLSTN1O94985 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLSTN1O94985 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.1■□□□□ 0.33
CLSTN1O94985 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.1■□□□□ 0.33
CLSTN1O94985 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 RNA5SP421-201ENST00000516864 134 ntBASIC17.1■□□□□ 0.33
CLSTN1O94985 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.1■□□□□ 0.33
CLSTN1O94985 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AL355385.1-201ENST00000606123 409 ntBASIC17.1■□□□□ 0.33
CLSTN1O94985 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.1■□□□□ 0.33
CLSTN1O94985 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.1■□□□□ 0.33
CLSTN1O94985 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLSTN1O94985 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLSTN1O94985 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms