Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHD2O14647 REXO1L2P-201ENST00000425429 2069 ntBASIC20.66■□□□□ 0.9
CHD2O14647 AC105250.1-201ENST00000509378 2057 ntBASIC20.66■□□□□ 0.9
CHD2O14647 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD2O14647 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CHD2O14647 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD2O14647 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD2O14647 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD2O14647 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD2O14647 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.66■□□□□ 0.9
CHD2O14647 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD2O14647 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
CHD2O14647 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.66■□□□□ 0.9
CHD2O14647 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CHD2O14647 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHD2O14647 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD2O14647 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHD2O14647 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD2O14647 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHD2O14647 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 KRT17P4-201ENST00000429445 819 ntBASIC20.65■□□□□ 0.9
CHD2O14647 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20.65■□□□□ 0.9
CHD2O14647 AP001527.2-201ENST00000614441 631 ntBASIC20.65■□□□□ 0.9
CHD2O14647 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHD2O14647 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD2O14647 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD2O14647 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 LILRP1-201ENST00000444199 1370 ntBASIC20.65■□□□□ 0.9
CHD2O14647 AC007292.2-201ENST00000593524 1812 ntBASIC20.65■□□□□ 0.9
CHD2O14647 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD2O14647 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 SALL4P5-201ENST00000419001 1760 ntBASIC20.65■□□□□ 0.9
CHD2O14647 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD2O14647 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD2O14647 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD2O14647 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CHD2O14647 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD2O14647 ST13P19-201ENST00000442505 1124 ntBASIC20.64■□□□□ 0.9
CHD2O14647 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD2O14647 AL035414.1-201ENST00000451327 857 ntBASIC20.64■□□□□ 0.9
CHD2O14647 PGAM1P12-201ENST00000505622 748 ntBASIC20.64■□□□□ 0.9
CHD2O14647 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.64■□□□□ 0.9
CHD2O14647 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD2O14647 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD2O14647 AC002472.4-201ENST00000641915 272 ntBASIC20.64■□□□□ 0.9
CHD2O14647 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD2O14647 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD2O14647 AC013726.1-201ENST00000563747 2285 ntBASIC20.64■□□□□ 0.89
CHD2O14647 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CHD2O14647 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHD2O14647 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 AC093909.3-201ENST00000504783 336 ntBASIC20.64■□□□□ 0.89
CHD2O14647 AC003686.1-201ENST00000550956 1034 ntBASIC20.64■□□□□ 0.89
CHD2O14647 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD2O14647 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CHD2O14647 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHD2O14647 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD2O14647 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHD2O14647 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD2O14647 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 RN7SL665P-201ENST00000578793 300 ntBASIC20.63■□□□□ 0.89
CHD2O14647 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD2O14647 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD2O14647 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD2O14647 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 RN7SKP109-201ENST00000410592 316 ntBASIC20.62■□□□□ 0.89
CHD2O14647 AC073869.2-201ENST00000417338 1026 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms