Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DDX39AO00148 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 BNIP3P42-201ENST00000454982 569 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.25■□□□□ 0.35
DDX39AO00148 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 BNIP3P29-201ENST00000598302 571 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 AC011447.5-201ENST00000616168 564 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 AC112693.3-201ENST00000624819 1983 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 LRRC59-203ENST00000576448 1531 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 AL157414.3-201ENST00000624276 1954 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 CICP6-201ENST00000457191 2729 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 REXO1L5P-201ENST00000622260 2098 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DDX39AO00148 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 C2orf27AP3-201ENST00000434123 579 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX39AO00148 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX39AO00148 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 AP005482.1-201ENST00000563722 1273 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.24■□□□□ 0.35
DDX39AO00148 AL354718.3-201ENST00000616414 581 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 CR382287.1-201ENST00000623954 586 ntBASIC17.24■□□□□ 0.35
DDX39AO00148 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DDX39AO00148 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DDX39AO00148 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.24■□□□□ 0.35
DDX39AO00148 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DDX39AO00148 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX39AO00148 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.23■□□□□ 0.35
DDX39AO00148 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 AL590640.2-201ENST00000457038 527 ntBASIC17.23■□□□□ 0.35
DDX39AO00148 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX39AO00148 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms