Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF8Q9UPP1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC136759.1-202ENST00000530858 2194 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC078875.1-201ENST00000431907 724 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 RN7SL258P-201ENST00000478664 300 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 RN7SL818P-201ENST00000485099 259 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC026803.1-201ENST00000569130 274 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 AC138894.2-201ENST00000602838 371 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 RN7SL725P-201ENST00000606439 259 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 KRT8P21-201ENST00000430398 1491 ntBASIC20.56■□□□□ 0.88
PHF8Q9UPP1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF8Q9UPP1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 RPL13AP19-201ENST00000434320 584 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 RN7SL67P-201ENST00000492147 296 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 AC098799.1-201ENST00000504752 800 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 MEG3_2.1-201ENST00000611456 105 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CICP11-201ENST00000434745 2827 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHF8Q9UPP1 REXO1L4P-201ENST00000605109 1937 ntBASIC20.55■□□□□ 0.88
PHF8Q9UPP1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.54■□□□□ 0.88
PHF8Q9UPP1 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms