Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 MYCLP2-201ENST00000449268 967 ntBASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 RN7SL752P-201ENST00000463779 287 ntBASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AC148477.4-201ENST00000613430 1793 ntBASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 DBET-201ENST00000630918 3363 ntBASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CUEDC1Q9NWM3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AC091951.1-201ENST00000512854 2465 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 C8orf49-201ENST00000525043 1968 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 INE1-201ENST00000456273 945 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 ELK1P1-201ENST00000485699 580 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AC092658.1-201ENST00000505836 891 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AC104596.2-201ENST00000512793 793 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 RAB43P1-201ENST00000561790 589 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CUEDC1Q9NWM3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms