Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC021305.1-201ENST00000520656 1514 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC020922.4-201ENST00000621389 339 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AP000769.1-203ENST00000637245 208 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AL139384.1-201ENST00000612143 3047 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 REXO1L2P-201ENST00000425429 2069 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 AL157414.3-201ENST00000624276 1954 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SLC25A15P1-201ENST00000456738 342 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 RN7SL582P-201ENST00000491078 279 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SLC25A15P3-201ENST00000505530 290 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AC010976.2-201ENST00000609697 852 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 DNM1P48-201ENST00000419538 439 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AC138701.2-201ENST00000553634 226 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 AC006986.1-201ENST00000612764 241 ntBASIC13.9□□□□□ -0.18
CHD8Q9HCK8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHD8Q9HCK8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 HLA-K-203ENST00000430151 1046 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC004066.1-201ENST00000502488 802 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC007952.4-201ENST00000573866 637 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms