Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ACKR1-201ENST00000368121 1240 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 BAATP1-201ENST00000412284 1225 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 NUS1P3-201ENST00000423502 862 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AP005019.2-201ENST00000615104 511 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AC134312.5-201ENST00000568031 1313 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 AL158070.2-201ENST00000623713 1621 ntBASIC15.83■□□□□ 0.12
RPRD1AQ96P16 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPRD1AQ96P16 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AC023024.2-201ENST00000623561 1993 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 PCDHA3-202ENST00000532566 4594 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 GHSR-202ENST00000427970 912 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AC012441.1-201ENST00000446669 685 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AC022137.2-201ENST00000503482 481 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 USP32P1-208ENST00000506594 1164 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 KRT18P25-201ENST00000508931 1278 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 SLC25A47P1-201ENST00000531577 414 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 BTNL10-201ENST00000595971 695 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AC233724.13-201ENST00000598383 410 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 AL162727.3-201ENST00000635661 2787 ntBASIC15.82■□□□□ 0.12
RPRD1AQ96P16 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPRD1AQ96P16 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms