Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNX27Q96L92 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.52■□□□□ 0.24
SNX27Q96L92 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX27Q96L92 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX27Q96L92 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC092978.1-202ENST00000637590 1327 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX27Q96L92 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX27Q96L92 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC026954.1-201ENST00000429771 1293 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SNX27Q96L92 CSF2RBP1-201ENST00000447905 391 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.52■□□□□ 0.24
SNX27Q96L92 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC078819.1-201ENST00000547454 765 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 AC012085.1-201ENST00000548270 765 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.52■□□□□ 0.24
SNX27Q96L92 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.52■□□□□ 0.24
SNX27Q96L92 AC132938.4-201ENST00000623835 848 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.52■□□□□ 0.24
SNX27Q96L92 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 TCAF2P1-201ENST00000291129 2421 ntBASIC16.52■□□□□ 0.24
SNX27Q96L92 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNX27Q96L92 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SNX27Q96L92 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.52■□□□□ 0.23
SNX27Q96L92 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.52■□□□□ 0.23
SNX27Q96L92 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNX27Q96L92 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 RPL17P11-201ENST00000417593 544 ntBASIC16.51■□□□□ 0.23
SNX27Q96L92 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.51■□□□□ 0.23
SNX27Q96L92 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 RN7SL48P-201ENST00000579283 293 ntBASIC16.51■□□□□ 0.23
SNX27Q96L92 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 AC138951.2-201ENST00000623455 1161 ntBASIC16.51■□□□□ 0.23
SNX27Q96L92 HLA-C-210ENST00000640219 976 ntBASIC16.51■□□□□ 0.23
SNX27Q96L92 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.51■□□□□ 0.23
SNX27Q96L92 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.51■□□□□ 0.23
SNX27Q96L92 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.51■□□□□ 0.23
SNX27Q96L92 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNX27Q96L92 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
SNX27Q96L92 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SNX27Q96L92 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 AL360270.3-201ENST00000609118 1348 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AC006001.1-201ENST00000325130 474 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms