Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 AC026410.3-201ENST00000514280 936 ntBASIC13.94□□□□□ -0.18
ATG4DQ86TL0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 API5-211ENST00000534695 560 ntTSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 AL049840.4-201ENST00000602422 811 ntBASIC13.94□□□□□ -0.18
ATG4DQ86TL0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATG4DQ86TL0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC007787.1-201ENST00000588095 1583 ntBASIC13.93□□□□□ -0.18
ATG4DQ86TL0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 RN7SL692P-201ENST00000464677 288 ntBASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC093004.1-201ENST00000508850 424 ntBASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 AC107373.2-201ENST00000607735 490 ntBASIC13.93□□□□□ -0.18
ATG4DQ86TL0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ATG4DQ86TL0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 AC093525.8-201ENST00000624099 1342 ntBASIC13.92□□□□□ -0.18
ATG4DQ86TL0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ATG4DQ86TL0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms