Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 BRWD1P1-201ENST00000401091 371 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX6-1P78426 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX6-1P78426 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX6-1P78426 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX6-1P78426 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 AC010319.3-201ENST00000597028 470 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 MIR6787-201ENST00000616675 61 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 GPR182-203ENST00000622922 591 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 AC068587.10-201ENST00000641210 219 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 KRT8P44-201ENST00000441609 1350 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX6-1P78426 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
NKX6-1P78426 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 AC126335.2-201ENST00000623362 4637 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 FAM45BP-202ENST00000592932 1624 ntBASIC13.64□□□□□ -0.23
NKX6-1P78426 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 AL603832.2-201ENST00000566195 2125 ntBASIC13.64□□□□□ -0.23
NKX6-1P78426 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NKX6-1P78426 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.64□□□□□ -0.23
NKX6-1P78426 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.64□□□□□ -0.23
NKX6-1P78426 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 LINC01115-203ENST00000606068 577 ntBASIC13.64□□□□□ -0.23
NKX6-1P78426 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 AC112504.1-201ENST00000623415 1841 ntBASIC13.64□□□□□ -0.23
NKX6-1P78426 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX6-1P78426 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NKX6-1P78426 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX6-1P78426 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX6-1P78426 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 AL009178.2-201ENST00000597278 2719 ntBASIC13.63□□□□□ -0.23
NKX6-1P78426 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NKX6-1P78426 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms