Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 GAPDHP40-201ENST00000505218 1006 ntBASIC14.75□□□□□ -0.05
VSX2P58304 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.75□□□□□ -0.05
VSX2P58304 TDH-203ENST00000531764 1110 ntBASIC14.75□□□□□ -0.05
VSX2P58304 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.75□□□□□ -0.05
VSX2P58304 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.75□□□□□ -0.05
VSX2P58304 AC136621.1-201ENST00000624017 2304 ntBASIC14.75□□□□□ -0.05
VSX2P58304 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
VSX2P58304 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VSX2P58304 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.75□□□□□ -0.05
VSX2P58304 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VSX2P58304 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.74□□□□□ -0.05
VSX2P58304 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VSX2P58304 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.74□□□□□ -0.05
VSX2P58304 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.74□□□□□ -0.05
VSX2P58304 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.74□□□□□ -0.05
VSX2P58304 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.74□□□□□ -0.05
VSX2P58304 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.74□□□□□ -0.05
VSX2P58304 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.74□□□□□ -0.05
VSX2P58304 RPSAP52-203ENST00000622976 1023 ntBASIC14.74□□□□□ -0.05
VSX2P58304 AC005252.2-201ENST00000624630 1141 ntBASIC14.74□□□□□ -0.05
VSX2P58304 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
VSX2P58304 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.74□□□□□ -0.05
VSX2P58304 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.74□□□□□ -0.05
VSX2P58304 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.74□□□□□ -0.05
VSX2P58304 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VSX2P58304 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
VSX2P58304 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms