Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX1P48742 AC006001.1-201ENST00000325130 474 ntBASIC16.21■□□□□ 0.19
LHX1P48742 TPM3P8-201ENST00000330554 643 ntBASIC16.21■□□□□ 0.19
LHX1P48742 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX1P48742 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX1P48742 EIF3FP3-201ENST00000434851 1086 ntBASIC16.21■□□□□ 0.19
LHX1P48742 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LHX1P48742 RPS2P32-201ENST00000439199 892 ntBASIC16.21■□□□□ 0.19
LHX1P48742 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX1P48742 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX1P48742 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX1P48742 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX1P48742 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX1P48742 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX1P48742 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX1P48742 DUX4L47-201ENST00000566374 394 ntBASIC16.21■□□□□ 0.19
LHX1P48742 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX1P48742 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LHX1P48742 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX1P48742 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX1P48742 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX1P48742 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX1P48742 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX1P48742 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LHX1P48742 MROH4P-201ENST00000431302 1578 ntBASIC16.21■□□□□ 0.18
LHX1P48742 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LHX1P48742 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.21■□□□□ 0.18
LHX1P48742 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LHX1P48742 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LHX1P48742 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LHX1P48742 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LHX1P48742 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LHX1P48742 FAM197Y7-201ENST00000432892 766 ntBASIC16.2■□□□□ 0.18
LHX1P48742 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.2■□□□□ 0.18
LHX1P48742 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 CSF2RBP1-201ENST00000447905 391 ntBASIC16.2■□□□□ 0.18
LHX1P48742 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.2■□□□□ 0.18
LHX1P48742 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.2■□□□□ 0.18
LHX1P48742 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 ENPP7P14-201ENST00000621765 1040 ntBASIC16.2■□□□□ 0.18
LHX1P48742 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.2■□□□□ 0.18
LHX1P48742 WASH3P-207ENST00000560956 1394 ntBASIC16.2■□□□□ 0.18
LHX1P48742 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX1P48742 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX1P48742 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX1P48742 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LHX1P48742 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
LHX1P48742 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
LHX1P48742 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LHX1P48742 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.19■□□□□ 0.18
LHX1P48742 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.19■□□□□ 0.18
LHX1P48742 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.19■□□□□ 0.18
LHX1P48742 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LHX1P48742 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.19■□□□□ 0.18
LHX1P48742 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.19■□□□□ 0.18
LHX1P48742 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.19■□□□□ 0.18
LHX1P48742 AC099336.1-201ENST00000417053 1171 ntBASIC16.19■□□□□ 0.18
LHX1P48742 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 HLA-V-201ENST00000429037 534 ntBASIC16.19■□□□□ 0.18
LHX1P48742 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.19■□□□□ 0.18
LHX1P48742 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.19■□□□□ 0.18
LHX1P48742 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX1P48742 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.19■□□□□ 0.18
LHX1P48742 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LHX1P48742 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms