Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLOCKO15516 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.72□□□□□ -0.05
CLOCKO15516 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CLOCKO15516 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 BEND3P1-201ENST00000421591 1944 ntBASIC14.72□□□□□ -0.05
CLOCKO15516 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLOCKO15516 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLOCKO15516 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.71□□□□□ -0.05
CLOCKO15516 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.71□□□□□ -0.05
CLOCKO15516 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLOCKO15516 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.71□□□□□ -0.05
CLOCKO15516 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.71□□□□□ -0.05
CLOCKO15516 AC140658.5-201ENST00000438532 169 ntBASIC14.71□□□□□ -0.05
CLOCKO15516 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.71□□□□□ -0.05
CLOCKO15516 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.71□□□□□ -0.05
CLOCKO15516 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 AC112191.1-201ENST00000523689 701 ntBASIC14.71□□□□□ -0.05
CLOCKO15516 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLOCKO15516 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.71□□□□□ -0.05
CLOCKO15516 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 AL355385.1-201ENST00000606123 409 ntBASIC14.71□□□□□ -0.05
CLOCKO15516 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.71□□□□□ -0.05
CLOCKO15516 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLOCKO15516 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.71□□□□□ -0.05
CLOCKO15516 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLOCKO15516 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLOCKO15516 WASH3P-207ENST00000560956 1394 ntBASIC14.71□□□□□ -0.06
CLOCKO15516 FO538757.1-201ENST00000623083 1397 ntBASIC14.71□□□□□ -0.06
CLOCKO15516 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.71□□□□□ -0.06
CLOCKO15516 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CLOCKO15516 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLOCKO15516 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 BX640514.1-201ENST00000583223 1918 ntBASIC14.7□□□□□ -0.06
CLOCKO15516 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.7□□□□□ -0.06
CLOCKO15516 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLOCKO15516 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.7□□□□□ -0.06
CLOCKO15516 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.7□□□□□ -0.06
CLOCKO15516 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.7□□□□□ -0.06
CLOCKO15516 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.7□□□□□ -0.06
CLOCKO15516 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms