Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 AC078819.1-201ENST00000547454 765 ntBASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 AC012085.1-201ENST00000548270 765 ntBASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 AC084364.1-201ENST00000551967 1556 ntBASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CTDP1Q9Y5B0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.77■□□□□ 0.43
CTDP1Q9Y5B0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 ACTBP8-201ENST00000403258 1108 ntBASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 RNA5SP486-201ENST00000515961 83 ntBASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AC091271.1-201ENST00000611877 1162 ntBASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.76■□□□□ 0.43
CTDP1Q9Y5B0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 MIR1202-201ENST00000408529 83 ntBASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 RPL13AP20-201ENST00000459725 609 ntBASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 AC084018.2-201ENST00000613093 2607 ntBASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 AC092127.1-201ENST00000567093 3455 ntBASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.75■□□□□ 0.43
CTDP1Q9Y5B0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms