Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
KLHL28Q9NXS3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.46□□□□□ -0.1
KLHL28Q9NXS3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 UGT1A2P-201ENST00000454886 866 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 SERBP1P3-201ENST00000459980 809 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC097493.3-201ENST00000509725 367 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC084364.1-201ENST00000551967 1556 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AL158211.3-201ENST00000607385 239 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 WASH3P-207ENST00000560956 1394 ntBASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
KLHL28Q9NXS3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 MROH4P-201ENST00000431302 1578 ntBASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KLHL28Q9NXS3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms