Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 BX284668.4-201ENST00000453917 508 ntBASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AC131206.1-201ENST00000538078 1211 ntBASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 MIR3619-201ENST00000579667 83 ntBASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 MBLAC2-202ENST00000514906 1936 ntBASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 KHSRPP1-201ENST00000427983 1768 ntBASIC17.71■□□□□ 0.43
CDK5RAP2Q96SN8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
CDK5RAP2Q96SN8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.71■□□□□ 0.42
CDK5RAP2Q96SN8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.71■□□□□ 0.42
CDK5RAP2Q96SN8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CDK5RAP2Q96SN8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 DPM3-202ENST00000368399 517 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AL645933.1-201ENST00000440087 609 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 KLF2P1-201ENST00000447438 1042 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC005077.2-201ENST00000449786 690 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC138627.1-207ENST00000641560 1006 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 ACE3P-201ENST00000423435 1973 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AC022532.1-201ENST00000624563 1728 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 SALL4P5-201ENST00000419001 1760 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AGAP7P-201ENST00000582299 2062 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 AGAP14-201ENST00000624701 2060 ntBASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDK5RAP2Q96SN8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AC105917.1-201ENST00000506637 2539 ntBASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 AC091812.3-201ENST00000621362 345 ntBASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDK5RAP2Q96SN8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms