Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 RN7SL163P-201ENST00000583100 276 ntBASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AL358472.3-201ENST00000608147 415 ntBASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AL139384.1-201ENST00000612143 3047 ntBASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MST1L-201ENST00000442552 2185 ntBASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AC008132.1-202ENST00000342005 1389 ntBASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 RN7SKP175-201ENST00000408472 289 ntBASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 FGFR3P5-201ENST00000564496 886 ntBASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAPGEF4Q8WZA2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC004899.1-201ENST00000424687 1714 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC091046.1-201ENST00000331871 207 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 FXNP2-201ENST00000411625 547 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ACTG1P2-201ENST00000415776 1125 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ACTG1P11-201ENST00000425411 1125 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC104073.2-201ENST00000453737 312 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC024681.1-201ENST00000521917 487 ntBASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.93■□□□□ 0.78
RAPGEF4Q8WZA2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms