Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 RN7SL8P-201ENST00000461771 266 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 RN7SL67P-201ENST00000492147 296 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 MIR6720-201ENST00000611664 98 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 MIR6842-201ENST00000612539 65 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 FAM90A2P-201ENST00000511144 1395 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 FAM90A25P-201ENST00000528404 1395 ntBASIC19.03■□□□□ 0.64
RC3H1Q5TC82 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.03■□□□□ 0.64
RC3H1Q5TC82 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 AC136759.1-202ENST00000530858 2194 ntBASIC19.02■□□□□ 0.64
RC3H1Q5TC82 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 OR2K2-202ENST00000374428 1038 ntBASIC19.02■□□□□ 0.64
RC3H1Q5TC82 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 RN7SL818P-201ENST00000485099 259 ntBASIC19.02■□□□□ 0.64
RC3H1Q5TC82 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 RN7SL725P-201ENST00000606439 259 ntBASIC19.02■□□□□ 0.64
RC3H1Q5TC82 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 AC079416.2-201ENST00000625035 1193 ntBASIC19.02■□□□□ 0.64
RC3H1Q5TC82 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RC3H1Q5TC82 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 PCDHA14-201ENST00000506751 2298 ntBASIC19.02■□□□□ 0.63
RC3H1Q5TC82 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 REXO1L4P-201ENST00000605109 1937 ntBASIC19.02■□□□□ 0.63
RC3H1Q5TC82 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RC3H1Q5TC82 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 BX088702.1-201ENST00000610784 235 ntBASIC19.01■□□□□ 0.63
RC3H1Q5TC82 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 AC012508.2-201ENST00000567613 1472 ntBASIC19.01■□□□□ 0.63
RC3H1Q5TC82 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RC3H1Q5TC82 AC074138.1-201ENST00000611182 1303 ntBASIC19■□□□□ 0.63
RC3H1Q5TC82 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19■□□□□ 0.63
RC3H1Q5TC82 AC024909.3-201ENST00000611513 2257 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms