Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A4P31645 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A4P31645 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SLC6A4P31645 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A4P31645 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A4P31645 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
SLC6A4P31645 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A4P31645 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A4P31645 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 LRRC59-203ENST00000576448 1531 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SLC6A4P31645 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 AL360270.3-201ENST00000609118 1348 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC073347.1-201ENST00000421633 2643 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC099336.1-201ENST00000417053 1171 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 CNN2P8-201ENST00000421872 913 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 FAM197Y7-201ENST00000432892 766 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 C2orf27AP3-201ENST00000434123 579 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AC007274.1-201ENST00000439805 662 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 BNIP3P42-201ENST00000454982 569 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AL590640.2-201ENST00000457038 527 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A4P31645 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 BNIP3P29-201ENST00000598302 571 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC011447.5-201ENST00000616168 564 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AL354718.3-201ENST00000616414 581 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 CR382287.1-201ENST00000623954 586 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A4P31645 AC126365.1-201ENST00000578585 1514 ntBASIC15.73■□□□□ 0.11
SLC6A4P31645 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A4P31645 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A4P31645 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC6A4P31645 AC013268.4-201ENST00000637413 2228 ntBASIC15.72■□□□□ 0.11
SLC6A4P31645 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC6A4P31645 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 AL162727.3-201ENST00000635661 2787 ntBASIC15.72■□□□□ 0.11
SLC6A4P31645 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SLC6A4P31645 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC6A4P31645 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SLC6A4P31645 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 AC078819.1-201ENST00000547454 765 ntBASIC15.72■□□□□ 0.11
SLC6A4P31645 AC012085.1-201ENST00000548270 765 ntBASIC15.72■□□□□ 0.11
SLC6A4P31645 AP000845.1-201ENST00000581677 2131 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms