Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 REXO1L5P-201ENST00000622260 2098 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PDGFBP01127 FER1L4-210ENST00000615531 5998 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 AL008718.2-201ENST00000609206 1313 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFBP01127 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFBP01127 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 AC010141.1-201ENST00000411585 623 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFBP01127 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.24■□□□□ 0.03
PDGFBP01127 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PDGFBP01127 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.24■□□□□ 0.03
PDGFBP01127 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 AP003398.1-201ENST00000531124 318 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.24■□□□□ 0.03
PDGFBP01127 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.24■□□□□ 0.03
PDGFBP01127 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PDGFBP01127 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PDGFBP01127 AC105137.3-201ENST00000617588 984 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 AL603764.1-201ENST00000636452 321 ntBASIC15.24■□□□□ 0.03
PDGFBP01127 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDGFBP01127 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFBP01127 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PDGFBP01127 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 AL645608.8-201ENST00000606034 2086 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 AC020910.5-201ENST00000623668 1865 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 AL583805.1-201ENST00000391389 531 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 HLA-K-203ENST00000430151 1046 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PDGFBP01127 AC130709.1-201ENST00000484779 1212 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.23■□□□□ 0.03
PDGFBP01127 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.23■□□□□ 0.03
PDGFBP01127 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.23■□□□□ 0.03
PDGFBP01127 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.23■□□□□ 0.03
PDGFBP01127 MIR6769A-201ENST00000617340 73 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 AC005618.3-201ENST00000624928 458 ntBASIC15.23■□□□□ 0.03
PDGFBP01127 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PDGFBP01127 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PDGFBP01127 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFBP01127 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFBP01127 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PDGFBP01127 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms