Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 MBLAC2-202ENST00000514906 1936 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 IGLL3P-201ENST00000412472 434 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 TSPY19P-201ENST00000418461 509 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 TSPY18P-201ENST00000441642 509 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AC073648.2-201ENST00000510116 352 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 HNRNPUP1-201ENST00000554987 333 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 AL136982.4-201ENST00000437689 1740 ntBASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.67□□□□□ -0.38
RCL1Q9Y2P8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 CICP8-201ENST00000455800 2813 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 EEF1DP4-201ENST00000446006 880 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AC012640.2-201ENST00000561606 901 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AC097359.3-201ENST00000603982 1210 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AC093458.2-201ENST00000623150 629 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 C8orf49-201ENST00000525043 1968 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AC018529.2-202ENST00000611482 3087 ntBASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms