Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC074044.1-201ENST00000609673 707 ntBASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC010327.5-201ENST00000586923 3061 ntBASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC027796.2-201ENST00000575326 344 ntBASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AL390754.1-201ENST00000619088 582 ntBASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC4Q9Y296 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AP003680.1-201ENST00000598970 3660 ntBASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC004890.2-204ENST00000481968 304 ntBASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAPPC4Q9Y296 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms