Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC008764.6-201ENST00000595909 2069 ntBASIC13.95□□□□□ -0.18
CHD8Q9HCK8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 PTGER4P2-201ENST00000328411 252 ntBASIC13.95□□□□□ -0.18
CHD8Q9HCK8 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 PTGER4P3-201ENST00000458150 252 ntBASIC13.95□□□□□ -0.18
CHD8Q9HCK8 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.95□□□□□ -0.18
CHD8Q9HCK8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC027612.2-202ENST00000445955 1199 ntBASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC068831.5-201ENST00000557387 328 ntBASIC13.94□□□□□ -0.18
CHD8Q9HCK8 MIR6893-201ENST00000613458 69 ntBASIC13.94□□□□□ -0.18
CHD8Q9HCK8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC055811.4-201ENST00000624039 1754 ntBASIC13.94□□□□□ -0.18
CHD8Q9HCK8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHD8Q9HCK8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AL133373.2-201ENST00000623187 2828 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC114947.1-202ENST00000514136 344 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC010632.2-201ENST00000588369 1224 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC012508.2-201ENST00000567613 1472 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms