Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 CICP11-201ENST00000434745 2827 ntBASIC16.54■□□□□ 0.24
BEST2Q8NFU1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST2Q8NFU1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 ACTBP8-201ENST00000403258 1108 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AL139094.1-201ENST00000405549 1188 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 C2orf27AP3-201ENST00000434123 579 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AL354718.3-201ENST00000616414 581 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CR382287.1-201ENST00000623954 586 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 AC136621.1-201ENST00000624017 2304 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 SSR4P1-203ENST00000599569 2260 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PKD1P5-201ENST00000532415 10291 ntBASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BEST2Q8NFU1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AC016694.1-201ENST00000434179 700 ntBASIC16.52■□□□□ 0.24
BEST2Q8NFU1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AC007551.1-201ENST00000457394 519 ntBASIC16.52■□□□□ 0.24
BEST2Q8NFU1 FTH1P14-201ENST00000482930 551 ntBASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST2Q8NFU1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms