Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC008267.1-201ENST00000474858 1069 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 MARK2P5-201ENST00000507649 634 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC004466.1-201ENST00000599515 1080 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 MIR4683-201ENST00000579659 81 ntBASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 AL162426.1-201ENST00000624141 743 ntBASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD4Q5XG99 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 FLJ16779-201ENST00000612722 7638 ntBASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
LYSMD4Q5XG99 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 AP000593.2-201ENST00000542775 1433 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms